Book The Best Hotels in San Juan Islands, WA for 2026 from CA $140 - Fully Refundable Options

A lighthouse on a rocky coastline with the ocean in the foreground.

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Our top choices for San Juan Islands hotels

A rustic wooden sign with the text "Inn To The Woods" and a moon and stars design.

A cozy living room with a bookshelf, a sofa, a coffee table, and a chair.

A wooden sign with "IN" written on it, a potted plant, and a pathway leading to a building.

A four-poster canopy bed with a brown bedspread, multiple decorative pillows, and a floral-patterned bench at the foot of the bed.

1. Inn to the Woods B&B

Friday Harbor

Betsy

A wooden pier leading to a building with large windows and a flagpole.

A wooden pier leading to a dock with boats, a grocer's shop, and a forested hillside in the background.

A wooden interior with a bench, tables, and a staircase leading to the hotel office.

A restaurant with stone walls, wooden tables, and chairs. There are large windows allowing natural light.

2. Lopez Islander Resort

Lopez Island

Diane

CA $253

CA $279 total

includes taxes & fees

Oct 4 - Oct 5

A wooden pier extending over calm water with a clear sky above.

A spacious dining area with wooden tables and chairs, large windows offering views of the outdoors, and a fireplace.

A bar area with wooden shelves, stools, and a counter.

A wooden deck with a glass door leading to a bedroom, a glass table, and a view of a lake with boats.

3. Kingfish at West Sound

Eastsound

Yoav

A multi-story hotel with a prominent entrance, a covered outdoor area, and a parking lot.

A modern restaurant interior with a central dining area featuring a white table with a geometric table runner, yellow chairs, and pendant lighting.

A reception area with a wooden ceiling design, a marble counter, and a wall-mounted artwork of wooden paddles.

A modern lounge area with a large window, comfortable seating, and a unique ceiling design.

4. Oxford Suites Bellingham

Meridian

Leah

CA $164

CA $203 total

includes taxes & fees

Oct 4 - Oct 5

A rustic cabin with a wooden exterior, a front door, and a pathway leading to it, surrounded by large rocks and trees.

A wooden cabin with a porch, surrounded by trees and pine needles.

A kitchen with wooden cabinets, a microwave, a hanging light fixture, a fireplace, and a window with a view of trees.

5. Lopez Farm Cottages & Tent Camping

Lopez Island

Taylor

A marina with boats docked, a mountain in the background, and buildings along the waterfront.

A spacious restaurant with large windows offering a view of the mountains. Tables are neatly arranged with chairs and wine glasses.

A hotel room with a sofa, armchair, desk, and a television. There is a large window with a view of the outdoors.

6. Swinomish Casino & Lodge

Whitmarsh Junction

John

CA $182

CA $205 total

includes taxes & fees

Sep 30 - Oct 1

A large, two-story house with a well-maintained lawn and a brick pathway leading to the front door.

A wooden deck with a round table and chairs, a sofa, and a view of a sunset over a landscape.

A living room with a fireplace, leather sofa, and a large painting above the fireplace.

A window with a view of a lake, a wooden building, and trees.

7. The Edenwild Boutique Inn

Lopez Island

Frances

CA $192

CA $212 total

includes taxes & fees

Sep 27 - Sep 28

Two people relaxing by a fire pit with a view of a harbor and a large ship.

A couple in white bathrobes sitting on a bed with a textured headboard, two wall-mounted lamps, and a decorative wall piece.

A coastal town at dusk with a marina, boats, and a large cruise ship docked.

A bar area with a large TV screen displaying a landscape, a bookshelf with books and bottles, and leather chairs.

8. Friday Harbor House

Friday Harbor

Robert

CA $514

CA $569 total

includes taxes & fees

Oct 14 - Oct 15

A wooden deck with a railing, potted plants, and hanging flower baskets.

A dining area with a wooden table and chairs, a patterned rug, and a painting on the wall.

A house with a red exterior, a front porch, and a staircase leading to the entrance.

A cozy room with a wooden bench, a chair, a small table with a lamp, and a stained glass window with a plant on the windowsill.

9. Kangaroo House B&B on Orcas Island

Eastsound

Ashlee

CA $318

CA $351 total

includes taxes & fees

Oct 20 - Oct 21

A wooden gazebo with glass doors and a stone floor, surrounded by trees.

A hot tub with a wooden ceiling and a view of a garden.

A natural landscape with a lake, forested hills, and a beach.

A wooden table with a vase of flowers and a sign reading "Otter's Pond."

10. Otters Pond Bed & Breakfast

Eastsound

Kristin

A modern interior with sofas, a table, and hanging plants.

A living room with a stone fireplace, a large window, a dark gray sofa, and a wooden coffee table.

A modern interior with a stone fireplace, hanging lamps, and a sign indicating the property is for sale.

A covered outdoor swimming pool area with a hot tub, benches, and emergency exit signs.

11. Friday Harbor Suites

Friday Harbor

Jennifer

CA $269

CA $297 total

includes taxes & fees

Oct 4 - Oct 5

A serene outdoor seating area with a table and chairs, surrounded by lush greenery and a tree.

A grassy area with a pond, trees, and a red chair.

A dining table set with plates of food, glasses, and a vase of flowers.

A spacious entryway with a wooden staircase, a patterned rug, and potted plants.

12. Trumpeter Inn

Friday Harbor

James

CA $325

CA $359 total

includes taxes & fees

Oct 1 - Oct 2

A living room with a sofa, armchairs, a coffee table, and a fireplace.

A waterfront promenade with benches, a gazebo, and a large white boat docked at a pier.

A building with a sign that reads "OFFICE Gift Shop" at the entrance.

A landscaped garden with neatly trimmed hedges, a white picket fence, and a wooden signboard.

13. Earthbox Inn & Spa

Friday Harbor

Amy

CA $325

CA $360 total

includes taxes & fees

Oct 1 - Oct 2

A spacious living room with a sofa, armchairs, a coffee table, and a dining area with chairs.

A modern living room with a stone fireplace, comfortable seating, and a large window.

A modern hotel lobby with a seating area, a reception desk, and a dining space.

A spacious lobby with a long reception desk, multiple seating areas, and large windows offering views of the outdoors.

14. Silver Reef Casino Resort

Ferndale

Allyn

CA $131

CA $142 total

includes taxes & fees

Oct 25 - Oct 26

A two-story house with a front porch, a picket fence, and a small garden area.

A balcony with a hot tub, two chairs, and a table set with plates, glasses, and a bottle.

A conservatory with a dining table set for four, surrounded by white chairs, and a lamp on the right.

A cozy room with a wooden ceiling, a bed with a quilt, a sofa with cushions, a table with a board game, and a window with shutters.

15. Tucker House Inn

Friday Harbor

ZACHARY

CA $204

CA $226 total

includes taxes & fees

Oct 12 - Oct 13

A two-story building with a covered porch, surrounded by a variety of flowering plants.

A dining room with a large wooden table surrounded by chairs, a patterned rug, and a cabinet with a mirror.

A man seated at a piano with sheet music, surrounded by books and a vase of flowers.

A room with a bed, a TV, a table with chairs, a rug, and a balcony with chairs.

16. Friday Harbor Grand B&B

Friday Harbor

Andrew

CA $363

CA $402 total

includes taxes & fees

Oct 4 - Oct 5

A motel with a row of rooms, a parking lot, and blooming flowers in the foreground.

A room with two beds, wooden walls, and a window.

A bathroom with a shower, a towel rack, and a shelf with a towel.

A hallway with an exit sign, a statue, and a Starbucks sign on the wall.

17. The Orca Inn

Friday Harbor

Andrew

CA $126

CA $140 total

includes taxes & fees

Oct 6 - Oct 7

A wooden deck with a view of a lake and mountains.

A cozy living room with a dining table, chairs, a patterned armchair, and a wooden coffee table.

A dining area with a round table, four chairs, and a potted plant.

A multi-story building with a sign reading "LANDMARK CONDOMINIUM LODGING".

18. Landmark Inn on Orcas Island

Eastsound

Randall

A building with a covered outdoor area, red doors, and hanging flower baskets.

A hotel room with a grey armchair, a small round table, a bedside table, a lamp, and a potted plant.

A pool area with a wooden deck, surrounded by trees with pinkish leaves.

A two-story building with a balcony, surrounded by a well-maintained garden with various plants and flowers.

19. Discovery Inn

Friday Harbor

Robert

CA $224

CA $248 total

includes taxes & fees

Oct 12 - Oct 13

A hotel room with a bed, a bathroom with a sink and mirror, and a wardrobe.

A modern living room with a fireplace, a dining area with a table and chairs, and a TV mounted on the wall.

A hotel room with a desk, a chair, a sofa, a microwave, a television, and artwork on the walls.

A compact kitchenette with a microwave, coffee maker, and a sink.

20. Holiday Inn & Suites Bellingham by IHG

Bellingham

douglas

CA $174

CA $197 total

includes taxes & fees

Oct 25 - Oct 26

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Stay near popular San Juan Islands attractions

A marina with boats docked, surrounded by forested hills and a town with buildings.

Roche Harbor Marina

9.4/10 (332 reviews)

Explore the waterfront in Roche Harbor with a trip to Roche Harbor Marina. While you're in the area, stroll along the seaside.

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Lime Kiln Point State Park

9.6/10 (317 reviews)

Also known as Whale Watch Park, this diving site is one of the best places in the world to view wild orca pods from the shore.

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A boat rental station on a calm lake surrounded by forested hills.

Cascade Lake

9.2/10 (20 reviews)

Relax on the beach of this picturesque lake, swim and kayak in the calm water and follow hiking trails to viewpoints and a waterfall.

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A lighthouse on a rocky cliff by the sea.

San Juan Island National Historic Park

9.4/10 (184 reviews)

You can learn about the history of Friday Harbor with a visit to San Juan Island National Historic Park. While you're in the area, stroll along the waterfront.

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People preparing kayaks on a riverbank with a small office and a red-roofed building in the background.

San Juan County Park

9.0/10 (87 reviews)

A hotspot for kayakers, this scenic and diverse campsite is the perfect retreat for both those wanting to relax and adventurists.

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Orcas Island Artworks

10.0/10 (2 reviews)

You can spend time exploring the galleries in Orcas Island Artworks during your travels in Olga. Wander the forest and lakeside while you're in the area.

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Doe Bay Hot Springs

9.2/10 (5 reviews)

You can take time to visit Doe Bay Hot Springs during your travels to Doe Bay. Wander the waterfront or discover the area's sunsets.

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Learn more about San Juan Islands

Kayaking between forested islands reveals hidden coves and curious seals, while orcas breach offshore during whale-watching tours. Hike Mount Constitution on Orcas Island for sweeping views, then explore Friday Harbor's galleries and savour fresh-caught seafood at waterfront restaurants.

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Top San Juan Islands Hotel Reviews

The Orca Inn

8/10 Good

"Great place in the perfect location while attending a nearby wedding. In my process range, no complaints."

Discovery Inn

10/10 Excellent

"Beautiful room, excellent place"

Inn to the Woods B&B

10/10 Excellent

"It's a very charming property. My bed was very comfortable, and I had a private hot tub on the patio with a view of Egg Lake! Breakfast was delicious and thoughtful. There are two adorable dogs on the property which made me very happy!"

Rosario Resort

8/10 Good

"This property is in a very nice location. We missed the sign on the main road and had to make a u-turn. The room was typical, they do not have staff for 24 hr check in. It's done on your phone. They send you your room number and code to get in. The problem with this is there is no wifi service and Verizon has no phone service. Before you get there make sure you have all the information that you need. With no service there you are out of luck. They have a private beach but we never saw it. We had been driving all day and arrived at 2:00. Check in is at 4:00. We hoped to check in a little early. If our room had been ready they would have charged us $25 to check in early. They should change that policy."

Landmark Inn on Orcas Island

10/10 Excellent

"Great location with amazing views. Vincent was super attentive and helpful. Very happy with this choice"

Outlook Inn

10/10 Excellent

"Great atmosphere!"

The Edenwild Boutique Inn

10/10 Excellent

"Beautiful place! Friendly staff. Great breakfast."

Deer Harbor Inn

8/10 Good

"It’s very basic considering the cost. The bed is very soft and not particularly comfortable with 2 people of different weights. Everything just felt a bit thrown together, which is ok but at this price point we had higher expectations."

Trumpeter Inn

10/10 Excellent

"A magical stay with amazing breakfast each day and cute farm animals to visit. Loved everything about it 💗"